EMERGING INFECTIONS
of the last 50 years

 
Legionnaire's disease
Bacterial: Legionella
Waterborne transmission
First encountered in 1976 at an American Legion convention in Philadelphia, where it was spread by the air conditioning system in the form of microscopic waterborne droplets. Legionella affects the lungs, where it causes a sometimes fatal pneumonia. A milder form of the disease is sometimes called Pontiac fever.
Prevention:  maintain sanitary conditions in air conditioning and cooling systems.

Lyme disease
Bacterial (spirochete): Borrelia burgdorfi    
Vector transmission (by black legged deer ticks, Ixodes scapularis)
The disease is ancient and has been found in mummies but was never understood. A cluster of children in Lyme, Connecticut first brought attention to the disease in the 1970s. From 1975-1995, prevalence of this disease increased x25 fold. Subsequent research led to the discovery of the tickborne transmission and the identification of the bacterium in 1981. Symptoms include fever, headache, fatigue, and skin rashes; untreated cases can spread to affect joints, the heart, and the nervous system. Once diagnosed, the disease can be treated with antibiotics.
Prevention:  minimize exposure to ticks by using pesticide sprays and clothing that tightly covers all areas of the body, especially in wooded areas; also check people and pets carefully for ticks after exposure to wooded areas.
Ecology:  Weasels (including badgers) and opossums once controlled ticks through their grooming activities; one opossum destroys an estimated 6000 ticks each week when grooming its fur. Fragmentation of forests through human activity has resulted in more deer and white-footed mice, and fewer opossums and badgers. Small rodents are now the greatest reservoir of Lyme disease.

A I D S
Viral: Human Immunodeficiency Virus (HIV)    
Transmission by direct contact with body fluids (blood, semen, etc.) during sexual activity, vaginal birth, or by blood-contaminated needles among drug users and in hospitals.
First noticed in 1980-1981 as a series of opportunistic infections among clusters of homosexual men in New York and San Francisco. Research showed the patients to have weakened immune systems (few or no T-4 lymphocytes). A virus that attacks T lymphocytes was identified in 1984 as the cause and was named Human Immunodeficiency Virus (HIV).
Further research revealed that the virus had originated in chimpanzees and/or monkeys (mangabeys) and had crossed into human populations in the 1950s (or possibly a bit earlier) in the Congo Basin, probably by the eating of "bush meat."
No cure exists, but anti-retroviral drugs (AZT=zidovudine and others) can greatly diminish viral load in patients.
Prevention:  avoid transmission through safer sexual practices, avoidance of IV drug use, the use of antiretroviral drugs during childbirth to HIV-positive women, and the careful screening of blood and blood products. AIDS education is essential; during 2000-2005, AIDS spread rapidly throughout South Africa when Thabo Mbeki's government ignored medical advice and dismissed the importance of AIDS education and safer sex.

Bird flu (Avian influenza)
Viral: Type A influenza virus.    
Fecal-oral transmission through birds and other animals.
A large reservoir for this disease persists among ducks, geese, swans, and other waterfowl, who all have immunity and can transmit the virus without getting sick. Chickens, however, have no immunity— it kills them quickly and dies out if flocks are small and isolated. Great increases in chicken flocks, proximity to wild fowl, and international transport (increased 20 fold in the last 30 years) have all spread the virus further.
In 1996, wild bird flu (strain H5N1) in Guangdong Province, China, spread from geese to other bird species and then to humans. The disease is now spread by migratory birds through their feces and by unsanitary disposal of waste among captive flocks, especially in Asia.
Viral strains infecting birds were formerly distinct from those infecting humans, but viral recombination was able to occur in pigs because they are susceptible to both the bird flu virus and the human flu virus. This recombination, which gave the bird flu the ability to infect humans, probably occured in the 1990s in China, which has over half the world's supply of pigs (about 6 times the U.S. supply).

H1N1 Swine flu
Viral.    
Fecal-oral transmission
First encountered during the trench warfare of World War I (40 million deaths in 1918 alone). The disease died out in humans, but it persisted in pigs until it reemerged in 2009.

E. coli   O157:H7
Bacterial: Escherichia coli, strain O157:H7    
Foodborne transmission,
often through careless sanitation in fast food restaurants (Jack-in-the-Box, Chipotle) or in agricultural fields (2018 outbreak involving Romaine lettuce from Arizona).

E. coli   "Superbug"
Bacterial: Escherichia coli, new strain    
Transmission probably foodborne or by contact
(most E. coli is foodborne).
In May 2016, a woman in Philadelphia was found to have a strain of E. coli resistant to all known antibiotics, including the rarely used Colistin (generally held in reserve for use only on bacteria resistant to everything else).
Here is a link to an article about it:
Http://phenomena.nationalgeographic.com/2016/05/26/colistin-r-9/


Ebola
Viral.    
Direct transmission by contact;
reservoir in tropical fruit bats.
  • First encountered in Ebola village, Congo, in the 1950s. Since then, minor, sporadic outbreaks have killed from 100 to 280 people at a time across Central Africa, mostly in Zaire (current D.R.Congo) and neighboring Uganda.
  • In the early 2000s, rebel groups in Guinea displaced many people and also cut down biodiverse forests to sell the timber. The fruit bats and human refugees were squeezed out of their habitat and often came into contact in crowded refugee camps. In 2014, an outbreak of Ebola in Guinea spread to 5 nearby countries, infecting about 26,000 people and also gorillas and chimpanzees. It then spread to overcrowded urban slums, including the national capitals of Guinea, Sierra Leone, and Liberia, causing over 11,000 deaths. Burial customs (hugging dead relatives) greatly added to the danger of transmission. The outbreak finally subsided in early 2016.
  • A new outbreak began in August, 2018 in the eastern highlands of the Democratic Republic of Congo. It was small at first, and health officials were able to contain this outbreak to fewer than 600 cases (including 320 deaths) during 2018 because it affected small villages only and no big cities, making it easier to trace and vaccinate all known contacts of infected persons. Unfortunately, anti-government rebel groups have become active in this area, and many people are distrustful of government workers and of the medical workers (mostly from international agencies) that have come to help. Several Ebola clinics have been attacked, and some medical agencies (including Medecins Sans Frontiers, also called Doctors Without Borders) have withdrawn from the conflict zone bordering neighboring Uganda. As of May 2019, over 1500 cases have occurred, with over 1000 deaths, and the disease has spread to the city of Butembo (pop. 670,000, comparable to Boston or Memphis).
  • Two monoclonal antibody treatments were approved in 2021.
  • Even though an effective vaccine is available, effective control of the epidemic has not yet been achieved. In 2021, the epidemic seems to have subsided in the D.R.Congo, but a new epidemic has begun in Cote d'Ivoire.


Zika
Viral.    
Transmission mostly by mosquito vectors, but also sexually.
Named after Zika forest in Uganda, where it first appeared in 1947. In many people, symptoms are mild to absent, so precautions are not taken, allowing the disease to spread. In others, Guillain-Barre Syndrome can occur as a devastating (sometimes fatal) side effect. In pregnant women infected with Zika, the disease can spread to the developing fetus and cause neurological defects such as underdeveloped brains (microcephaly).
To prevent transmission, the most important precaution is to avoid exposure to mosquitoes, particularly Aedes aegypti. Precautions are especially important if you travel to a region (such as Brazil or the Caribbean) where Zika already occurs.
In 2015-2016, an outbreak spread from Brazil to other parts of the Americas including the Caribbean (especially Puerto Rico) and also back to Africa and to Hawaii. Cases have occurred in most tropical countries (but not at high altitudes). All reported cases of Zika in the mainland United States (as of January 2019) are from travelers who visited Zika-affected areas, except for one laboratory worker who contracted Zika from a needle-stick injury.

Measles
Viral.    
Transmission by aerosols (via sneezing and coughing).
Formerly widespread (14,000 people died across Europe in early 20th century), but largely gone from U.S. by 2000 because of widespread vaccination.
In the early 2000s there were a few dozen cases in California, mostly among unvaccinated people. In 2014, an outbreak centered at first in Disneyland (near Los Angeles) and spread to 7 states. Most of the 140 people affected in California were unvaccinated for "philosophical" objections including fear of vaccination. Medical authorities have long insisted that the dangers of being unvaccinated are hundreds to thousands of times greater than any risks from the vaccine itself.
Beginning in early 2019, outbreaks occured in several states (Washington, California, and especially New York) among communities where many people were unvaccinated. The disease then spread across 23 states and several foreign countries (including Israel, Ukraine, and the Philippines). As of May 2019, there are over 750 cases in the United States, mostly among children (several of whom have died), and the outbreak is not yet controlled.

MRSA (Methicillin Resistant Staphylococcus Aureus)
Bacterial: Staphylococcus aureus
Transmission by pus from sores, via rugs, bedsheets, or furniture.
Spreads throughout body, causing death when lungs become infected.
Prevention: Squeeze pus from sores and discard carefully; also frequent baths with chlorine bleach.
In Holland, patients are isolated under strict quarantine and treated with antibiotics; as a result, only 1% of Staphylococcus infection is MRSA.
In Denmark, strict laws have restricted overuse of antibiotics (especially in agriculture for cattle and pigs); as a result, MRSA went from 18% of Staphylococcus infection to less than 1%.

SARS (Severe Acute Respiratory Syndrome)
Viral (coronavirus, related to common cold).    
Transmission mostly by feces (poor sanitation),
also by animal bites; reservoir in horseshoe bats.
In 2003, an outbreak began in Guangzhou, China's "wet markets," where many species of both wild and tame animals are caged in close proximity and often poor sanitation. The disease was reported in racoons, ferrets, badgers, snakes, palm civets, and pigs, and it then mutated to infect people as well. Increasing wealth in China led to increased demand for exotic cuisine and also more pig farms close to bat-infested forests. An immigrant from Hong Kong to Toronto spread the illness to Canada, closing down two hospitals; many Asians in Canada were shunned.

Monkey Pox  (now usually called Mpox)
Viral: poxvirus (related to smallpox)    
Transmission by contact;
reservoir in rodents.
People vaccinated against smallpox in the period from 1960-1980 were immune to monkey pox. After the 1980s, however, smallpox vaccination programs ended, and monkey pox spread among unvaccinated people. In 2005-2007, an outbreak in the Democratic Republic of Congo spread to 15 villages before it subsided. Few cases were reported from 2010-2020, mostly in central Africa. In 2022-2023, an outbreak resulted in over 32,000 cases in the U.S. and nearly 95,000 confirmed cases worldwide.

West Nile virus
Viral.    
Transmission by mosquitoes from reservoir in migratory birds, robins, and crows.
First isolated in 1937 in Uganda. Woodpeckers and rails were resistant to the virus, but their numbers declined with deforestation. Robins and crows became more abundant, and they spread the virus to humans. Migrating birds spread the disease across several continents.
Ecological: In the mild winter of 1999, more mosquitoes bred in the U.S. In the summer drought that followed, thirsty birds crowded into fewer water holes, leading to a West Nile outbreak in New York City. West Nile can also increase by as much as 33% after a season of heavy rainfall. (Other mosquito-borne diseases, such as malaria, also increase after warmer weather, and global climate change will make this even worse.)

MERS (Middle East Respiratory Syndrome)
Viral (coronavirus, related to common cold).    
Transmission by aerosols (coughing, sneezing, contact with counters and other surfaces).
First outbreak reported in 2012 in Saudi Arabia. Spread by contact with camels.

Cholera
Bacterial: Vibrio cholerae.
Waterborne transmission from infected stools (fecal-oral transmission).
First emerged in early 1800s in vicinity of Kolkata (Bangladesh and eastern India), then spread to various densely populated cities in North America (e.g. New York around 1831) and Europe (e.g. London around 1852). Improved sanitation has greatly reduced the threat, but it reappears from time to time whevever a hurricane, flood, earthquake, or other disaster disrupts or overwhelms sanitation systems.
In 2010, an earthquake in Haiti was followed by a cholera outbreak when an Asian strain of the bacterium was introduced by some UN volunteers from Nepal.

Top (Legionnaire's)

Chikungunya
Viral.    
Transmission by mosquitoes
Was considered of minor importance until an outbreak occurred in 2013.

COVID-19
Viral (coronavirus, related to common cold and to SARS).    
Transmission mostly by aerosols (via coughing and sneezing).
First reported in Wuhan, China, in December of 2019, from where it quickly spread worldwide during the first 8 weeks of 2020. Indicence first peaked in April of 2020, then again in July, then again in November. Many restaurants and other businesses were forced to close and the public was urged to wear face masks and maintain a six foot distance from other people. Most schools and colleges closed their facilities and converted to remote learning instead. By late November 2020, the United States had suffered the most, with over 12.4 million confirmed cases and over 250,000 deaths. Worldwide, nearly 60 million cases were reported through late November 2020, with close to 1.4 million deaths.
    In December 2020, two vaccines were approved in the U.S., and a third vaccine in February 2021. Cases in the U.S. declined over the next 3 months to about one-third of their maximum levels, but progress leveled off in late March 2021. By mid-April 2021, nearly 136 million cases had been reported worldwide, including 31 million in the United States. Nearly 3 million deaths had occurred worldwide, including over half a million in the United States.
Link to JHU Coronavirus Center




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